difftastic/sample_files/newick_1.nwk

462 lines
14 KiB
Plaintext

(
(
(
Drosophila_melanogaster,
Caenorhabditis_elegans
)
,
(
(
Ciona_intestinalis,
Ciona_savignyi
)
,
(
(
Eptatretus_burgeri,
Petromyzon_marinus
)
,
(
(
(
(
Danio_rerio,
Astyanax_mexicanus
)
,
(
(
(
(
(
Poecilia_formosa,
Xiphophorus_maculatus
)
,
Oryzias_latipes
)
,
Oreochromis_niloticus
)
,
(
(
Tetraodon_nigroviridis,
Takifugu_rubripes
)
,
Gasterosteus_aculeatus
)
)
,
Gadus_morhua
)
)
,
Lepisosteus_oculatus
)
,
(
(
(
(
(
(
(
(
(
(
(
(
(
(
(
(
(
(
(
(
Cricetulus_griseus_chok1gshd,
Cricetulus_griseus_crigri
)
,
Mesocricetus_auratus
)
,
Peromyscus_maniculatus_bairdii
)
,
Microtus_ochrogaster
)
,
(
(
(
(
(
(
(
(
(
(
(
(
(
Mus_musculus,
Mus_musculus_BALB/cJ
)
,
(
(
Mus_musculus_C3H/HeJ,
Mus_musculus_CBA/J
)
,
Mus_musculus_DBA/2J
)
)
,
Mus_musculus_AKR/J
)
,
(
(
Mus_musculus_FVB/NJ,
Mus_musculus_NOD/ShiLtJ
)
,
Mus_musculus_domesticus_WSB/EiJ
)
)
,
(
Mus_musculus_129S1/SvImJ,
Mus_musculus_LP/J
)
)
,
(
Mus_musculus_reference_CL57BL6,
Mus_musculus_C57BL/6NJ
)
)
,
Mus_musculus_NZO/HlLtJ
)
,
Mus_musculus_musculus_PWK/PhJ
)
,
Mus_musculus_castaneus_CAST/EiJ
)
,
Mus_spretus
)
,
Mus_caroli
)
,
Mus_pahari
)
,
Rattus_norvegicus
)
)
,
Nannospalax_galili
)
,
Jaculus_jaculus
)
,
Dipodomys_ordii
)
,
(
(
(
(
(
Cavia_porcellus,
Cavia_aperea
)
,
Chinchilla_lanigera
)
,
Octodon_degus
)
,
(
(
Heterocephalus_glaber_female,
Heterocephalus_glaber_male
)
,
Fukomys_damarensis
)
)
,
Ictidomys_tridecemlineatus
)
)
,
(
Oryctolagus_cuniculus,
Ochotona_princeps
)
)
,
Tupaia_belangeri
)
,
(
(
(
(
(
(
(
(
(
Pan_troglodytes,
Pan_paniscus
)
,
Homo_sapiens
)
,
Gorilla_gorilla
)
,
Pongo_abelii
)
,
Nomascus_leucogenys
)
,
(
(
(
(
(
Cercocebus_atys,
Mandrillus_leucophaeus
)
,
Papio_anubis
)
,
(
(
Macaca_fascicularis,
Macaca_mulatta
)
,
Macaca_nemestrina
)
)
,
Chlorocebus_sabaeus
)
,
(
(
Rhinopithecus_roxellana,
Rhinopithecus_bieti
)
,
Colobus_angolensis_palliatus
)
)
)
,
(
(
(
Cebus_capucinus,
Saimiri_boliviensis_boliviensis
)
,
Callithrix_jacchus
)
,
Aotus_nancymaae
)
)
,
Carlito_syrichta
)
,
(
(
Microcebus_murinus,
Propithecus_coquereli
)
,
Otolemur_garnettii
)
)
)
,
(
(
Erinaceus_europaeus,
Sorex_araneus
)
,
(
(
(
(
(
(
Sus_scrofa,
Vicugna_pacos
)
,
(
(
Ovis_aries,
Capra_hircus
)
,
Bos_taurus
)
)
,
Tursiops_truncatus
)
,
Equus_caballus
)
,
(
(
(
Ailuropoda_melanoleuca,
Mustela_putorius_furo
)
,
Canis_familiaris
)
,
(
(
Panthera_pardus,
Panthera_tigris_altaica
)
,
Felis_catus
)
)
)
,
(
Pteropus_vampyrus,
Myotis_lucifugus
)
)
)
)
,
(
Dasypus_novemcinctus,
Choloepus_hoffmanni
)
)
,
(
(
Loxodonta_africana,
Procavia_capensis
)
,
Echinops_telfairi
)
)
,
(
(
Sarcophilus_harrisii,
Notamacropus_eugenii
)
,
Monodelphis_domestica
)
)
,
Ornithorhynchus_anatinus
)
,
(
(
(
(
(
Gallus_gallus,
Meleagris_gallopavo
)
,
Anas_platyrhynchos
)
,
(
Ficedula_albicollis,
Taeniopygia_guttata
)
)
,
Pelodiscus_sinensis
)
,
Anolis_carolinensis
)
)
,
Xenopus_tropicalis
)
,
Latimeria_chalumnae
)
)
)
)
)
,
Saccharomyces_cerevisiae
)
;